Inference for Panel Partially Observed Markov Processes


Documentation for package ‘panelPomp’ version 1.1.0.2

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panelPomp-package Inference for PanelPOMPs (Panel Partially Observed Markov Processes)
.modifyOther Internal function for modifying pparamArray in Mif2
.modifySelf Internal function for modifying pparamArray in Mif2
as Coercing 'panelPomp' objects as 'list', 'pompList' or 'data.frame'
coef-method Manipulating 'panelPomp' objects
coef<--method Manipulating 'panelPomp' objects
coef<--method Modifying parameters of filtered objects
contacts Contacts model
get_col Get single column or row without dropping names
get_dim Get single column or row without dropping names
get_row Get single column or row without dropping names
length-method Manipulating 'panelPomp' objects
logLik-method Handling of loglikelihood replicates
logLik-method Particle filtering for panel data
mif2 PIF: Panel iterated filtering
mif2-method PIF: Panel iterated filtering
mif2d.ppomp-class PIF: Panel iterated filtering
names-method Manipulating 'panelPomp' objects
panel-designs #' Create design matrix for panelPomp calculations
panelGompertz Panel Gompertz model
panelGompertzLikelihood Likelihood for a panel Gompertz model via a Kalman filter
panelMeasles Make a panelPomp model using UK measles data.
panelPomp Constructing 'panelPomp' objects
panelPomp-class Constructing 'panelPomp' objects
panelPomp_methods Manipulating 'panelPomp' objects
panelRandomWalk Panel random walk model
panel_loglik Handling of loglikelihood replicates
panel_logmeanexp Log-mean-exp for panels
params Manipulating 'panelPomp' object parameter formats
pfilter Particle filtering for panel data
pfilter-method Particle filtering for panel data
pfilterd.ppomp-class Particle filtering for panel data
plot panelPomp plotting facilities
plot-method panelPomp plotting facilities
print-method Manipulating 'panelPomp' objects
runif_panel_design #' Create design matrix for panelPomp calculations
shared-method Manipulating 'panelPomp' objects
shared<--method Manipulating 'panelPomp' objects
shared<--method Modifying parameters of filtered objects
show-method Manipulating 'panelPomp' objects
simulate Simulations of a panel of partially observed Markov process
simulate-method Simulations of a panel of partially observed Markov process
specific-method Manipulating 'panelPomp' objects
specific<--method Manipulating 'panelPomp' objects
specific<--method Modifying parameters of filtered objects
toMatrixPparams Manipulating 'panelPomp' object parameter formats
toParamList Manipulating 'panelPomp' objects
toParamVec Manipulating 'panelPomp' object parameter formats
traces-method PIF: Panel iterated filtering
twentycities He et al. 2010 twenty UK cities weekly reported measles data
uk_measles Weekly reported measles data for 362 locations in the UK
unitLogLik-method Particle filtering for panel data
unit_objects-method Manipulating 'panelPomp' objects
window-method Manipulating 'panelPomp' objects
[-method Manipulating 'panelPomp' objects
[[-method Manipulating 'panelPomp' objects